SubtiBank SubtiBank
yqjX [2019-05-21 18:34:07]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

yqjX [2019-05-21 18:34:07]

unknown
locus
BSU23700
pI
5.26
mw
13.03 kDa
protein length
112 aa Sequence Blast
gene length
339 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.5|DNA repair/ recombination] → [category|SW 3.1.5.6|Other proteins]

    • Gene

    Coordinates
    2,464,227 2,464,565

    The protein

    Paralogous protein(s)

  • [protein|A9D5625FF5F1A3845FF6F8A290F647CCA73D39EF|YolD], [protein|94F2146AC6998CC77CD2E86CE8BE8DC98AEBB9CD|YozL]

    • Expression and Regulation

    Operons

    genes
    [gene|F0BC150F59730E64BA9AB3F979544EF6B5CC4E9E|polY2]-[gene|9BC3DF46C944A0FD5CAAB4513C4AF00EFC5FC8D5|yqjX]-[gene|5B8A6D282E34683726BD6C36E09A6C36E8F99795|yqjY]-[gene|9F88AC3A792F4EE8AA853849BBCF5065717B1D8B|yqjZ]-[gene|3ECD25A4ED9556E74112285B11FC180A7091D730|yqkA]-[gene|DC1C1D4BE1A7F4E28792A2B8273AFE2C7F90E58C|yqkB]-[gene|30363923724EBD39C27967B25B486C71453190D1|yqkC]
    description
    [Pubmed|22383849]

    regulatory mechanism

  • [protein|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA]: repression, [Pubmed|15469515,16267290], in [regulon|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA regulon]

    • regulation

  • induced upon DNA damage ([protein|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA]) [Pubmed|15469515,16267290]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-C404 (yqjX::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2402 NBRP B. subtilis, Japan]
  • BKE23700 ([gene|9BC3DF46C944A0FD5CAAB4513C4AF00EFC5FC8D5|yqjX]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE23700 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GTTGCCCCTTTTTAAATGGT, downstream forward: _UP4_TAAAGTCTCTCCTCCTGTTT
  • BKK23700 ([gene|9BC3DF46C944A0FD5CAAB4513C4AF00EFC5FC8D5|yqjX]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK23700 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GTTGCCCCTTTTTAAATGGT, downstream forward: _UP4_TAAAGTCTCTCCTCCTGTTT

    • References

  • 16267290,30916324